Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 CT025642.3-201ENSMUST00000225503 4086 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Rcbtb2-209ENSMUST00000164822 3531 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Rab3il1-203ENSMUST00000121418 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm43764-201ENSMUST00000202553 3172 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Rtp3-203ENSMUST00000199891 2463 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Tle3-208ENSMUST00000160882 3523 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Prdm2-201ENSMUST00000105778 7304 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm7061-201ENSMUST00000118127 1416 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm12058-201ENSMUST00000118614 437 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm12583-201ENSMUST00000120677 853 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm11660-201ENSMUST00000120955 412 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm12826-201ENSMUST00000121841 379 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Olfml3-204ENSMUST00000169286 874 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm19091-201ENSMUST00000208120 978 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 AC090962.1-201ENSMUST00000226066 1799 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm44815-201ENSMUST00000206812 1633 ntBASIC8.5□□□□□ -1.05
Trim63Q38HM4 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Dis3l2-201ENSMUST00000065694 3085 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim63Q38HM4 Vmn1r41-206ENSMUST00000228068 1536 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Cxcl2-202ENSMUST00000200681 1859 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Cldn8-201ENSMUST00000049697 2356 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Arhgef38-203ENSMUST00000161022 1912 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Cdk16-202ENSMUST00000115364 3270 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms