Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 AC151971.6-201ENSMUST00000216193 866 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cdx2P43241 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cdx2P43241 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.93□□□□□ -0.82
Cdx2P43241 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdx2P43241 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Cdx2P43241 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 AC147366.2-201ENSMUST00000226859 2038 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm8806-201ENSMUST00000120076 1407 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Gm10344-201ENSMUST00000193498 1419 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Cdx2P43241 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm11411-201ENSMUST00000117951 719 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Cdx2P43241 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Gm6967-201ENSMUST00000182599 1007 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm5194-201ENSMUST00000221457 742 ntBASIC9.92□□□□□ -0.82
Cdx2P43241 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.92□□□□□ -0.82
Cdx2P43241 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Cdx2P43241 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdx2P43241 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cdx2P43241 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Gm11573-201ENSMUST00000119956 394 ntBASIC9.91□□□□□ -0.82
Cdx2P43241 Gm11800-201ENSMUST00000120050 579 ntBASIC9.91□□□□□ -0.82
Cdx2P43241 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms