Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Vcam1P29533 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vcam1P29533 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.96□□□□□ -0.5
Vcam1P29533 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Vcam1P29533 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.95□□□□□ -0.5
Vcam1P29533 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.95□□□□□ -0.5
Vcam1P29533 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Gm12736-201ENSMUST00000119330 236 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.95□□□□□ -0.5
Vcam1P29533 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vcam1P29533 Gm40332-201ENSMUST00000199847 938 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Gm7812-201ENSMUST00000203479 874 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC11.95□□□□□ -0.5
Vcam1P29533 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.95□□□□□ -0.5
Vcam1P29533 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 AC154766.1-201ENSMUST00000226550 936 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Gm26205-201ENSMUST00000082907 134 ntBASIC11.95□□□□□ -0.5
Vcam1P29533 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.95□□□□□ -0.5
Vcam1P29533 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vcam1P29533 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vcam1P29533 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vcam1P29533 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Gm13286-201ENSMUST00000117750 537 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 Gm12345-201ENSMUST00000119288 898 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Gm6353-201ENSMUST00000223234 1051 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 AC154683.1-201ENSMUST00000228409 1284 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Vcam1P29533 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Gm25483-201ENSMUST00000083224 227 ntBASIC11.94□□□□□ -0.5
Vcam1P29533 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Vcam1P29533 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vcam1P29533 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Vcam1P29533 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms