Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm12645-201ENSMUST00000117297 275 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm14113-201ENSMUST00000121399 976 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm5526-201ENSMUST00000153604 423 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm16581-201ENSMUST00000160730 991 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm42430-201ENSMUST00000197209 616 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm42751-201ENSMUST00000198065 559 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm26782-203ENSMUST00000227103 751 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 AC158986.2-201ENSMUST00000227487 618 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gm5310-201ENSMUST00000197861 1511 ntBASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm8446-201ENSMUST00000188834 2712 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm8659-201ENSMUST00000120024 1084 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm6881-201ENSMUST00000121811 833 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm25953-201ENSMUST00000175338 83 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm26272-201ENSMUST00000179241 132 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm27440-201ENSMUST00000184785 107 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm18182-201ENSMUST00000191380 1251 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Igh-VJ558P01758 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms