Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm11331-201ENSMUST00000119764 288 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm5244-201ENSMUST00000164001 339 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm9520-201ENSMUST00000209460 1253 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm7319-201ENSMUST00000210047 778 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim13Q9CYB0 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm15074-201ENSMUST00000117603 936 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm20426-201ENSMUST00000173657 440 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm21092-201ENSMUST00000178995 955 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm37073-201ENSMUST00000192469 1222 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm37826-201ENSMUST00000195329 322 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm9555-201ENSMUST00000200908 583 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm18466-201ENSMUST00000209147 499 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm8679-201ENSMUST00000210651 1036 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 CT025525.2-201ENSMUST00000227743 423 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms