Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm23612-201ENSMUST00000103823 110 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm11619-201ENSMUST00000117474 237 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm12397-201ENSMUST00000117674 615 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm13022-201ENSMUST00000121181 285 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm15196-201ENSMUST00000121406 482 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm11993-201ENSMUST00000121861 820 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm13857-201ENSMUST00000139645 173 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm22146-201ENSMUST00000157397 288 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm23576-201ENSMUST00000179918 110 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm26943-201ENSMUST00000182295 957 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm27953-201ENSMUST00000185171 143 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm24791-201ENSMUST00000104284 131 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm8482-201ENSMUST00000117972 471 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm13841-201ENSMUST00000118829 483 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm11449-201ENSMUST00000119175 476 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm12489-201ENSMUST00000119364 148 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm14213-201ENSMUST00000119778 768 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm14113-201ENSMUST00000121399 976 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm16397-201ENSMUST00000122201 494 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm25288-201ENSMUST00000122800 265 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm8210-201ENSMUST00000178557 483 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm15454-201ENSMUST00000179718 483 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm6069-201ENSMUST00000196501 463 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm6344-201ENSMUST00000075962 483 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms