Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Mir671-201ENSMUST00000102432 98 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm24933-201ENSMUST00000103762 110 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm23252-201ENSMUST00000103776 110 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm15602-201ENSMUST00000116162 465 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm6517-201ENSMUST00000121056 511 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm17782-201ENSMUST00000174345 880 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm26443-201ENSMUST00000179610 110 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm8384-201ENSMUST00000190905 704 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm37909-201ENSMUST00000193157 2159 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Gm43817-201ENSMUST00000196459 2262 ntBASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps54Q5SPW0 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm3712-201ENSMUST00000118523 2071 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm13204-201ENSMUST00000120110 821 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm8083-201ENSMUST00000203976 475 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms