Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.43□□□□□ -0.9
P01808 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.43□□□□□ -0.9
P01808 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
P01808 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P01808 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.42□□□□□ -0.9
P01808 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.42□□□□□ -0.9
P01808 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
P01808 Gm38111-201ENSMUST00000194817 2741 ntBASIC9.42□□□□□ -0.9
P01808 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm11801-201ENSMUST00000117807 746 ntBASIC9.42□□□□□ -0.9
P01808 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC9.42□□□□□ -0.9
P01808 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC9.42□□□□□ -0.9
P01808 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.42□□□□□ -0.9
P01808 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm27316-201ENSMUST00000184884 277 ntBASIC9.42□□□□□ -0.9
P01808 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm18182-201ENSMUST00000191380 1251 ntBASIC9.42□□□□□ -0.9
P01808 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.42□□□□□ -0.9
P01808 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Gm9619-201ENSMUST00000211587 762 ntBASIC9.42□□□□□ -0.9
P01808 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Gm10238-201ENSMUST00000089689 408 ntBASIC9.42□□□□□ -0.9
P01808 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
P01808 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P01808 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.42□□□□□ -0.9
P01808 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Gm6727-201ENSMUST00000204102 1518 ntBASIC9.41□□□□□ -0.9
P01808 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.41□□□□□ -0.9
P01808 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.41□□□□□ -0.9
P01808 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.41□□□□□ -0.9
P01808 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P01808 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P01808 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
P01808 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
P01808 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms