Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm15602-201ENSMUST00000116162 465 ntBASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm11475-201ENSMUST00000118482 476 ntBASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim9Q8C7M3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm43817-201ENSMUST00000196459 2262 ntBASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm9515-201ENSMUST00000200276 647 ntBASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms