Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Il18bp-203ENSMUST00000209844 1594 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cacna1sQ02789 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cacna1sQ02789 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm24556-201ENSMUST00000104547 130 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 AC133598.3-207ENSMUST00000225918 704 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm7799-201ENSMUST00000133080 476 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Zfp978-202ENSMUST00000154154 1250 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Mir6965-201ENSMUST00000184733 64 ntBASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm16252-202ENSMUST00000215604 1232 ntTSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cacna1sQ02789 Calr3-202ENSMUST00000109974 1371 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Enpp3-203ENSMUST00000218044 1346 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Wdr45-202ENSMUST00000115687 1299 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 H2-M5-203ENSMUST00000169189 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Gm26964-201ENSMUST00000182516 832 ntTSL 2 BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Mir6378-201ENSMUST00000183357 107 ntBASIC12.96□□□□□ -0.33
Cacna1sQ02789 Gm5668-201ENSMUST00000220897 436 ntBASIC12.96□□□□□ -0.33
Cacna1sQ02789 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1sQ02789 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cacna1sQ02789 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cacna1sQ02789 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.96□□□□□ -0.33
Cacna1sQ02789 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1sQ02789 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm17084-201ENSMUST00000163843 511 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 AC124686.1-201ENSMUST00000225546 522 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm11224-201ENSMUST00000120465 1111 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm22649-201ENSMUST00000175134 298 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm26445-201ENSMUST00000177557 109 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm8254-201ENSMUST00000182326 972 ntBASIC12.95□□□□□ -0.34
Cacna1sQ02789 Gm29471-201ENSMUST00000190527 700 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms