Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Nsmce2-203ENSMUST00000227173 1122 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Gm25201-201ENSMUST00000083093 170 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.34□□□□□ -0.91
H3f3aP84244 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
H3f3aP84244 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
H3f3aP84244 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.34□□□□□ -0.92
H3f3aP84244 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
H3f3aP84244 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm11619-201ENSMUST00000117474 237 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Gm11996-201ENSMUST00000117538 915 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Gm15003-201ENSMUST00000118884 446 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm37020-201ENSMUST00000195303 992 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm45745-201ENSMUST00000211447 1180 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Gm25517-201ENSMUST00000083865 134 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
H3f3aP84244 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.33□□□□□ -0.92
H3f3aP84244 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.33□□□□□ -0.92
H3f3aP84244 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.33□□□□□ -0.92
H3f3aP84244 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.33□□□□□ -0.92
H3f3aP84244 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
H3f3aP84244 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.33□□□□□ -0.92
H3f3aP84244 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
H3f3aP84244 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
H3f3aP84244 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.32□□□□□ -0.92
H3f3aP84244 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
H3f3aP84244 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC9.32□□□□□ -0.92
H3f3aP84244 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.32□□□□□ -0.92
H3f3aP84244 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
H3f3aP84244 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
H3f3aP84244 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
H3f3aP84244 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms