Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Gm12733-201ENSMUST00000119871 767 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC8.44□□□□□ -1.06
Lmo4P61969 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm6773-201ENSMUST00000182377 878 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Gm6216-201ENSMUST00000182390 687 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Gm6967-201ENSMUST00000182599 1007 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Lmo4P61969 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm18119-201ENSMUST00000219972 616 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC8.44□□□□□ -1.06
Lmo4P61969 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm18749-201ENSMUST00000222410 692 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 AC156016.4-201ENSMUST00000227470 647 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Lmo4P61969 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm8968-201ENSMUST00000199133 1303 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.44□□□□□ -1.06
Lmo4P61969 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.44□□□□□ -1.06
Lmo4P61969 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC8.44□□□□□ -1.06
Lmo4P61969 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC8.43□□□□□ -1.06
Lmo4P61969 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC8.43□□□□□ -1.06
Lmo4P61969 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm12470-201ENSMUST00000117239 1049 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm13002-201ENSMUST00000119286 682 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm8464-202ENSMUST00000146697 1142 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm4750-201ENSMUST00000151942 1142 ntBASIC8.43□□□□□ -1.06
Lmo4P61969 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Lmo4P61969 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms