Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.95□□□□□ -0.82
Nkx2-6P43688 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-6P43688 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.95□□□□□ -0.82
Nkx2-6P43688 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-6P43688 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-6P43688 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-6P43688 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Mir1896-201ENSMUST00000122641 81 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm28916-201ENSMUST00000186988 699 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm28746-201ENSMUST00000187453 380 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm42511-201ENSMUST00000196160 234 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm42689-201ENSMUST00000202403 404 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 AC139155.1-201ENSMUST00000226043 444 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 AC103672.1-201ENSMUST00000227502 365 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm22341-201ENSMUST00000083775 129 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.94□□□□□ -0.82
Nkx2-6P43688 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx2-6P43688 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm45663-201ENSMUST00000210429 1632 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm8725-201ENSMUST00000221829 1333 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm15636-201ENSMUST00000119205 668 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm4705-201ENSMUST00000177415 354 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm26943-201ENSMUST00000182295 957 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm5335-201ENSMUST00000182995 1000 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm27444-201ENSMUST00000184157 137 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Ighv1-70-201ENSMUST00000196509 351 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Gm30055-201ENSMUST00000203175 803 ntBASIC9.93□□□□□ -0.82
Nkx2-6P43688 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC9.93□□□□□ -0.82
Nkx2-6P43688 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms