Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Gm18944-201ENSMUST00000207672 643 ntBASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Gm6331-201ENSMUST00000217890 450 ntBASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
Rc3h1Q4VGL6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm6238-201ENSMUST00000120999 465 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm23582-201ENSMUST00000158530 139 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm8022-201ENSMUST00000191763 904 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm42780-201ENSMUST00000197083 734 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm43854-201ENSMUST00000200418 394 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm44146-201ENSMUST00000203508 816 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm5189-201ENSMUST00000221796 261 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h1Q4VGL6 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm8216-201ENSMUST00000117232 601 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm12372-201ENSMUST00000121654 768 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm24140-201ENSMUST00000122773 326 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm42779-201ENSMUST00000198807 406 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Gm43124-201ENSMUST00000201878 278 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h1Q4VGL6 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms