Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm37464-201ENSMUST00000192431 2220 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Lsm3P62311 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Gm9089-201ENSMUST00000122027 526 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm15276-201ENSMUST00000145953 498 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Snora78-201ENSMUST00000158630 128 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.4□□□□□ -0.9
Lsm3P62311 Gm27572-201ENSMUST00000183702 255 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Gm2253-201ENSMUST00000211775 414 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lsm3P62311 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Hdac7-204ENSMUST00000116409 4113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.4□□□□□ -0.9
Lsm3P62311 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm3P62311 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lsm3P62311 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lsm3P62311 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.4□□□□□ -0.91
Lsm3P62311 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Lsm3P62311 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Lsm3P62311 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm3P62311 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Ccdc148-201ENSMUST00000077687 3977 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Ercc3-201ENSMUST00000025241 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm8199-201ENSMUST00000121323 823 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.39□□□□□ -0.91
Lsm3P62311 Mir1982-201ENSMUST00000157368 74 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm24749-201ENSMUST00000157838 343 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm43186-201ENSMUST00000198130 824 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm5881-201ENSMUST00000204737 367 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm45433-201ENSMUST00000209386 247 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm9368-201ENSMUST00000219348 831 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Lsm3P62311 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.39□□□□□ -0.91
Lsm3P62311 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm3P62311 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms