Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm37105-201ENSMUST00000192251 2085 ntBASIC8.46□□□□□ -1.05
Lmo4P61969 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Mir598-201ENSMUST00000102094 79 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC8.46□□□□□ -1.06
Lmo4P61969 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm25394-201ENSMUST00000157338 133 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm24368-201ENSMUST00000175388 106 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Gm17944-201ENSMUST00000186351 643 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Gm37009-201ENSMUST00000193297 361 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm43866-201ENSMUST00000203894 839 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm8991-201ENSMUST00000073014 1075 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm37516-201ENSMUST00000192593 1954 ntBASIC8.46□□□□□ -1.06
Lmo4P61969 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC8.46□□□□□ -1.06
Lmo4P61969 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Lmo4P61969 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Lmo4P61969 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC8.46□□□□□ -1.06
Lmo4P61969 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Lmo4P61969 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm13281-201ENSMUST00000120871 567 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC8.45□□□□□ -1.06
Lmo4P61969 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm3687-201ENSMUST00000161710 460 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm20474-201ENSMUST00000180089 596 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Gm26532-201ENSMUST00000180630 690 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Lmo4P61969 BB187690-201ENSMUST00000198619 1176 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Gm18894-201ENSMUST00000198794 694 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Gm31941-201ENSMUST00000209689 350 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 AC161877.1-201ENSMUST00000227736 699 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm4880-201ENSMUST00000207645 1696 ntBASIC8.45□□□□□ -1.06
Lmo4P61969 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Lmo4P61969 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Lmo4P61969 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Lmo4P61969 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms