Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxd8P23463 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxd8P23463 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hoxd8P23463 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxd8P23463 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm20541-201ENSMUST00000173035 1406 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm11736-201ENSMUST00000121468 505 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Mir1896-201ENSMUST00000122641 81 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm16285-201ENSMUST00000162999 347 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm24368-201ENSMUST00000175388 106 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm20778-201ENSMUST00000178524 627 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm29651-201ENSMUST00000189088 697 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm28766-201ENSMUST00000191086 234 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm37390-201ENSMUST00000192452 872 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm7815-201ENSMUST00000196104 832 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm6681-201ENSMUST00000205215 607 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm19269-201ENSMUST00000211401 804 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.01□□□□□ -0.65
Hoxd8P23463 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxd8P23463 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxd8P23463 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11□□□□□ -0.65
Hoxd8P23463 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Gm42731-201ENSMUST00000201839 1641 ntBASIC11□□□□□ -0.65
Hoxd8P23463 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC11□□□□□ -0.65
Hoxd8P23463 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11□□□□□ -0.65
Hoxd8P23463 Gm8707-201ENSMUST00000183325 980 ntBASIC11□□□□□ -0.65
Hoxd8P23463 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11□□□□□ -0.65
Hoxd8P23463 Gm37676-201ENSMUST00000195496 507 ntBASIC11□□□□□ -0.65
Hoxd8P23463 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11□□□□□ -0.65
Hoxd8P23463 Gm42687-201ENSMUST00000199075 164 ntBASIC11□□□□□ -0.65
Hoxd8P23463 Gm43106-201ENSMUST00000199485 637 ntBASIC11□□□□□ -0.65
Hoxd8P23463 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxd8P23463 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC11□□□□□ -0.65
Hoxd8P23463 Gm44917-201ENSMUST00000208798 520 ntBASIC11□□□□□ -0.65
Hoxd8P23463 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11□□□□□ -0.65
Hoxd8P23463 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11□□□□□ -0.65
Hoxd8P23463 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC11□□□□□ -0.65
Hoxd8P23463 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11□□□□□ -0.65
Hoxd8P23463 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms