Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm26313-201ENSMUST00000157770 308 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm29543-201ENSMUST00000188138 967 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm43460-201ENSMUST00000202491 1057 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm30055-201ENSMUST00000203175 803 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm42970-201ENSMUST00000196407 1352 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm13281-201ENSMUST00000120871 567 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm26119-201ENSMUST00000175601 104 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm7047-201ENSMUST00000196224 1063 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Nsmce2-203ENSMUST00000227173 1122 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usf3B2RUQ2 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm43167-201ENSMUST00000202001 1606 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm8968-201ENSMUST00000199133 1303 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm43052-201ENSMUST00000201451 1628 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Gm44740-201ENSMUST00000205603 1614 ntBASIC8.79□□□□□ -1
Usf3B2RUQ2 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC8.79□□□□□ -1
Usf3B2RUQ2 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm13192-201ENSMUST00000101199 208 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Mir1249-201ENSMUST00000116791 98 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm10443-201ENSMUST00000119024 210 ntBASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms