Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ybx1P62960 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm13777-201ENSMUST00000118208 345 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm5501-201ENSMUST00000165917 832 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm22119-201ENSMUST00000175594 99 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm8707-201ENSMUST00000183325 980 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm5865-201ENSMUST00000198713 637 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Gm45308-201ENSMUST00000210610 415 ntBASIC10.8□□□□□ -0.68
Ybx1P62960 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ybx1P62960 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ybx1P62960 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ybx1P62960 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ybx1P62960 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ybx1P62960 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ybx1P62960 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.79□□□□□ -0.68
Ybx1P62960 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ybx1P62960 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.79□□□□□ -0.68
Ybx1P62960 Mir7088-201ENSMUST00000184227 86 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.79□□□□□ -0.68
Ybx1P62960 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm10581-201ENSMUST00000097986 231 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Ybx1P62960 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.79□□□□□ -0.68
Ybx1P62960 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ybx1P62960 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ybx1P62960 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.79□□□□□ -0.68
Ybx1P62960 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ybx1P62960 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.78□□□□□ -0.68
Ybx1P62960 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ybx1P62960 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ybx1P62960 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms