Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.16□□□□□ -0.94
Cd28P31041 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
Cd28P31041 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.16□□□□□ -0.94
Cd28P31041 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm25343-201ENSMUST00000157460 107 ntBASIC9.16□□□□□ -0.94
Cd28P31041 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm21092-201ENSMUST00000178995 955 ntBASIC9.16□□□□□ -0.94
Cd28P31041 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Cd28P31041 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.16□□□□□ -0.94
Cd28P31041 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.16□□□□□ -0.94
Cd28P31041 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.16□□□□□ -0.94
Cd28P31041 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.16□□□□□ -0.94
Cd28P31041 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cd28P31041 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm11952-201ENSMUST00000121172 821 ntBASIC9.15□□□□□ -0.94
Cd28P31041 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.15□□□□□ -0.94
Cd28P31041 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.15□□□□□ -0.94
Cd28P31041 Mir6366-201ENSMUST00000184472 82 ntBASIC9.15□□□□□ -0.94
Cd28P31041 Gm19927-201ENSMUST00000185792 781 ntBASIC9.15□□□□□ -0.94
Cd28P31041 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm42710-201ENSMUST00000200608 985 ntBASIC9.15□□□□□ -0.94
Cd28P31041 Gm7848-201ENSMUST00000210739 718 ntBASIC9.15□□□□□ -0.94
Cd28P31041 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Id2-203ENSMUST00000222667 958 ntBASIC9.15□□□□□ -0.94
Cd28P31041 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.15□□□□□ -0.94
Cd28P31041 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cd28P31041 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.15□□□□□ -0.94
Cd28P31041 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cd28P31041 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cd28P31041 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms