Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.33□□□□□ -0.92
P20040 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
P20040 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
P20040 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
P20040 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.32□□□□□ -0.92
P20040 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.32□□□□□ -0.92
P20040 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.32□□□□□ -0.92
P20040 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.32□□□□□ -0.92
P20040 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.32□□□□□ -0.92
P20040 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.32□□□□□ -0.92
P20040 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.32□□□□□ -0.92
P20040 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.32□□□□□ -0.92
P20040 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.32□□□□□ -0.92
P20040 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.32□□□□□ -0.92
P20040 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.32□□□□□ -0.92
P20040 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.32□□□□□ -0.92
P20040 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.32□□□□□ -0.92
P20040 Gm44814-201ENSMUST00000207018 434 ntBASIC9.32□□□□□ -0.92
P20040 Gm45310-201ENSMUST00000210436 275 ntBASIC9.32□□□□□ -0.92
P20040 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm8255-201ENSMUST00000218693 305 ntBASIC9.32□□□□□ -0.92
P20040 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.32□□□□□ -0.92
P20040 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
P20040 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.32□□□□□ -0.92
P20040 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
P20040 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.32□□□□□ -0.92
P20040 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
P20040 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.32□□□□□ -0.92
P20040 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
P20040 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.31□□□□□ -0.92
P20040 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.31□□□□□ -0.92
P20040 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
P20040 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Snord23-201ENSMUST00000116828 109 ntBASIC9.31□□□□□ -0.92
P20040 Gm12389-201ENSMUST00000117696 418 ntBASIC9.31□□□□□ -0.92
P20040 Gm13351-201ENSMUST00000118087 414 ntBASIC9.31□□□□□ -0.92
P20040 Gm3828-201ENSMUST00000121817 257 ntBASIC9.31□□□□□ -0.92
P20040 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.31□□□□□ -0.92
P20040 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.31□□□□□ -0.92
P20040 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.31□□□□□ -0.92
P20040 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.31□□□□□ -0.92
P20040 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
P20040 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.31□□□□□ -0.92
P20040 Platr10-202ENSMUST00000191479 818 ntBASIC9.31□□□□□ -0.92
P20040 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.31□□□□□ -0.92
P20040 Gm44420-201ENSMUST00000203669 490 ntBASIC9.31□□□□□ -0.92
P20040 Gm6423-201ENSMUST00000204315 934 ntBASIC9.31□□□□□ -0.92
P20040 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.31□□□□□ -0.92
P20040 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Gm2594-201ENSMUST00000214774 742 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms