Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.11□□□□□ -0.79
Fv4P11370 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Fv4P11370 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Mir7035-201ENSMUST00000184713 82 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Gm28833-201ENSMUST00000189671 559 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gm37141-201ENSMUST00000191938 422 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Gm43947-201ENSMUST00000203019 959 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Gm7594-201ENSMUST00000218595 871 ntBASIC10.11□□□□□ -0.79
Fv4P11370 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gm7536-201ENSMUST00000077389 444 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.11□□□□□ -0.79
Fv4P11370 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.11□□□□□ -0.79
Fv4P11370 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Fv4P11370 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Fv4P11370 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Fv4P11370 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Gm6158-201ENSMUST00000109467 904 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Gm14807-201ENSMUST00000116640 983 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Mir6366-201ENSMUST00000184472 82 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.1□□□□□ -0.79
Fv4P11370 Gm37986-201ENSMUST00000193285 383 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Gm45120-201ENSMUST00000208880 408 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.1□□□□□ -0.79
Fv4P11370 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.1□□□□□ -0.79
Fv4P11370 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Fv4P11370 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Fv4P11370 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Fv4P11370 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Fv4P11370 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Fv4P11370 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms