Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Gm7539-201ENSMUST00000189789 630 ntBASIC8.62□□□□□ -1.03
LtaP09225 Gm8625-201ENSMUST00000194185 1077 ntBASIC8.62□□□□□ -1.03
LtaP09225 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
LtaP09225 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.62□□□□□ -1.03
LtaP09225 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC8.62□□□□□ -1.03
LtaP09225 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC8.62□□□□□ -1.03
LtaP09225 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Gm26782-203ENSMUST00000227103 751 ntBASIC8.62□□□□□ -1.03
LtaP09225 Nsmce2-203ENSMUST00000227173 1122 ntBASIC8.62□□□□□ -1.03
LtaP09225 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC8.62□□□□□ -1.03
LtaP09225 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC8.62□□□□□ -1.03
LtaP09225 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.62□□□□□ -1.03
LtaP09225 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
LtaP09225 Gm5641-201ENSMUST00000091130 1488 ntBASIC8.62□□□□□ -1.03
LtaP09225 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC8.62□□□□□ -1.03
LtaP09225 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Gm43167-201ENSMUST00000202001 1606 ntBASIC8.62□□□□□ -1.03
LtaP09225 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LtaP09225 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Selenot-ps-201ENSMUST00000119098 593 ntBASIC8.61□□□□□ -1.03
LtaP09225 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Gm12337-201ENSMUST00000119634 400 ntBASIC8.61□□□□□ -1.03
LtaP09225 Gm14052-201ENSMUST00000121434 1031 ntBASIC8.61□□□□□ -1.03
LtaP09225 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13857-201ENSMUST00000139645 173 ntBASIC8.61□□□□□ -1.03
LtaP09225 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC8.61□□□□□ -1.03
LtaP09225 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC8.61□□□□□ -1.03
LtaP09225 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Gm24328-201ENSMUST00000175104 67 ntBASIC8.61□□□□□ -1.03
LtaP09225 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC8.61□□□□□ -1.03
LtaP09225 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Gm42780-201ENSMUST00000197083 734 ntBASIC8.61□□□□□ -1.03
LtaP09225 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC8.61□□□□□ -1.03
LtaP09225 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 AC158986.2-201ENSMUST00000227487 618 ntBASIC8.61□□□□□ -1.03
LtaP09225 AC161172.1-201ENSMUST00000227801 486 ntBASIC8.61□□□□□ -1.03
LtaP09225 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC8.61□□□□□ -1.03
LtaP09225 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LtaP09225 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC8.61□□□□□ -1.03
LtaP09225 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LtaP09225 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LtaP09225 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms