Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Pknox1O70477 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pknox1O70477 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Pknox1O70477 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pknox1O70477 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Pknox1O70477 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC10.38□□□□□ -0.75
Pknox1O70477 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pknox1O70477 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.38□□□□□ -0.75
Pknox1O70477 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.38□□□□□ -0.75
Pknox1O70477 Gm5801-201ENSMUST00000182247 780 ntBASIC10.38□□□□□ -0.75
Pknox1O70477 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.38□□□□□ -0.75
Pknox1O70477 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.38□□□□□ -0.75
Pknox1O70477 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Pknox1O70477 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Pknox1O70477 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Pknox1O70477 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pknox1O70477 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pknox1O70477 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm8216-201ENSMUST00000117232 601 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm14497-201ENSMUST00000119537 580 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm11544-201ENSMUST00000120215 382 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm13182-201ENSMUST00000122241 312 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm11988-201ENSMUST00000122321 1069 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm15744-201ENSMUST00000161734 213 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm26976-201ENSMUST00000182929 908 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Gm5130-201ENSMUST00000210233 959 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm2594-201ENSMUST00000214774 742 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.37□□□□□ -0.75
Pknox1O70477 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pknox1O70477 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pknox1O70477 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pknox1O70477 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms