Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Ginm1-202ENSMUST00000065124 300 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Tgfbi-201ENSMUST00000045173 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm22144-201ENSMUST00000157402 102 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Mir8113-201ENSMUST00000184956 129 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm37826-201ENSMUST00000195329 322 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm7848-201ENSMUST00000210739 718 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm7344-201ENSMUST00000212122 1222 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm19409-201ENSMUST00000198244 2858 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Gm7353-201ENSMUST00000069044 2866 ntBASIC10.36□□□□□ -0.75
Ccdc28bQ8CEG5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc28bQ8CEG5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms