Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp40Q8BWR4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm11427-201ENSMUST00000117952 1696 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm4880-201ENSMUST00000207645 1696 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm6773-201ENSMUST00000182377 878 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm6967-201ENSMUST00000182599 1007 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm21631-201ENSMUST00000195041 754 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm31941-201ENSMUST00000209689 350 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Gm18119-201ENSMUST00000219972 616 ntBASIC14.37□□□□□ -0.11
Usp40Q8BWR4 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp40Q8BWR4 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm14571-201ENSMUST00000118292 570 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm24368-201ENSMUST00000175388 106 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm21963-201ENSMUST00000179519 330 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm37009-201ENSMUST00000193297 361 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm45310-201ENSMUST00000210436 275 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm4883-201ENSMUST00000085702 528 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp40Q8BWR4 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm37036-201ENSMUST00000192836 2506 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm12733-201ENSMUST00000119871 767 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm15373-201ENSMUST00000121495 214 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm13898-201ENSMUST00000141865 610 ntBASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp40Q8BWR4 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms