Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm3P62311 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm3P62311 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm3P62311 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm3P62311 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.44□□□□□ -0.9
Lsm3P62311 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Rrn3-201ENSMUST00000023363 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Lsm3P62311 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm3P62311 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Lsm3P62311 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Cald1-204ENSMUST00000115026 4080 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Pcx-204ENSMUST00000224726 4034 ntAPPRIS P3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 B3gat1-205ENSMUST00000161115 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Lsm3P62311 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm12241-201ENSMUST00000118330 726 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm12380-201ENSMUST00000119012 544 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm8302-201ENSMUST00000119217 852 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm11425-201ENSMUST00000119608 498 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm12196-201ENSMUST00000120954 262 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm8100-201ENSMUST00000182906 988 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm29499-201ENSMUST00000189151 486 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm28329-201ENSMUST00000191208 689 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm29171-201ENSMUST00000191397 486 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm43179-201ENSMUST00000198797 275 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm3961-201ENSMUST00000204425 994 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm8913-201ENSMUST00000209491 641 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm7344-201ENSMUST00000212122 1222 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm3P62311 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm9396-201ENSMUST00000076703 567 ntBASIC9.43□□□□□ -0.9
Lsm3P62311 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm3P62311 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Gm12116-201ENSMUST00000131851 2770 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Lrrc8d-202ENSMUST00000120847 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm3P62311 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm3P62311 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm3P62311 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lsm3P62311 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm3P62311 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Gm20743-202ENSMUST00000194322 2830 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lsm3P62311 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.42□□□□□ -0.9
Lsm3P62311 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm3P62311 BC030343-201ENSMUST00000199606 2439 ntBASIC9.42□□□□□ -0.9
Lsm3P62311 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms