Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm7781-201ENSMUST00000117258 788 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm13002-201ENSMUST00000119286 682 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.53□□□□□ -0.72
Atxn1P54254 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm36980-201ENSMUST00000195643 622 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm44173-201ENSMUST00000204316 132 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.53□□□□□ -0.72
Atxn1P54254 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm18165-201ENSMUST00000217426 928 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC10.53□□□□□ -0.72
Atxn1P54254 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Atxn1P54254 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.53□□□□□ -0.72
Atxn1P54254 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Atxn1P54254 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Atxn1P54254 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Atxn1P54254 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.52□□□□□ -0.72
Atxn1P54254 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Atxn1P54254 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atxn1P54254 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Atxn1P54254 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.52□□□□□ -0.72
Atxn1P54254 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm9574-201ENSMUST00000173127 845 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Mir6396-201ENSMUST00000183603 111 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Atxn1P54254 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.52□□□□□ -0.73
Atxn1P54254 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Atxn1P54254 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.52□□□□□ -0.73
Atxn1P54254 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.52□□□□□ -0.73
Atxn1P54254 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Atxn1P54254 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Atxn1P54254 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms