Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Upk2P38575 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.2□□□□□ -0.94
Upk2P38575 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Upk2P38575 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm13022-201ENSMUST00000121181 285 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.19□□□□□ -0.94
Upk2P38575 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm23647-201ENSMUST00000175042 109 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Rn5s-201ENSMUST00000177555 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm22109-201ENSMUST00000177995 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm22291-201ENSMUST00000178027 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s141-201ENSMUST00000178066 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm23284-201ENSMUST00000178069 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s100-201ENSMUST00000178106 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s111-201ENSMUST00000178203 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s105-201ENSMUST00000178499 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s149-201ENSMUST00000178520 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm24312-201ENSMUST00000178677 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s103-201ENSMUST00000178755 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s123-201ENSMUST00000178804 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s142-201ENSMUST00000178820 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s144-201ENSMUST00000178859 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s139-201ENSMUST00000178975 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s134-201ENSMUST00000178983 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s136-201ENSMUST00000179080 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm25018-201ENSMUST00000179081 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s104-201ENSMUST00000179107 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s113-201ENSMUST00000179143 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s133-201ENSMUST00000179275 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s117-201ENSMUST00000179431 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm25212-201ENSMUST00000179432 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s138-201ENSMUST00000179476 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s122-201ENSMUST00000179500 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s143-201ENSMUST00000179542 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s107-201ENSMUST00000179704 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm26391-201ENSMUST00000179843 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s110-201ENSMUST00000179995 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s128-201ENSMUST00000180096 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 n-R5s124-201ENSMUST00000180334 119 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.19□□□□□ -0.94
Upk2P38575 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.19□□□□□ -0.94
Upk2P38575 Gm29787-201ENSMUST00000222129 849 ntBASIC9.19□□□□□ -0.94
Upk2P38575 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm24089-201ENSMUST00000093696 109 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.19□□□□□ -0.94
Upk2P38575 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.19□□□□□ -0.94
Upk2P38575 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Upk2P38575 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Upk2P38575 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.18□□□□□ -0.94
Upk2P38575 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Upk2P38575 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Upk2P38575 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Upk2P38575 Gm11988-201ENSMUST00000122321 1069 ntBASIC9.18□□□□□ -0.94
Upk2P38575 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Upk2P38575 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms