Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm25580-201ENSMUST00000083409 327 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.17□□□□□ -0.94
Cd28P31041 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm16166-201ENSMUST00000118291 787 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm3828-201ENSMUST00000121817 257 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Gm6425-201ENSMUST00000136332 790 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm23045-201ENSMUST00000175041 96 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.17□□□□□ -0.94
Cd28P31041 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.17□□□□□ -0.94
Cd28P31041 Mir7686-201ENSMUST00000200604 57 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm33080-201ENSMUST00000205429 172 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm5130-201ENSMUST00000210233 959 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Gm7594-201ENSMUST00000218595 871 ntBASIC9.17□□□□□ -0.94
Cd28P31041 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cd28P31041 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cd28P31041 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Gm46218-202ENSMUST00000215520 1956 ntBASIC9.17□□□□□ -0.94
Cd28P31041 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.17□□□□□ -0.94
Cd28P31041 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.17□□□□□ -0.94
Cd28P31041 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cd28P31041 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cd28P31041 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms