Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm8194-201ENSMUST00000159783 859 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm33080-201ENSMUST00000205429 172 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm18514-201ENSMUST00000218980 436 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm26976-201ENSMUST00000182929 908 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm5865-201ENSMUST00000198713 637 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm7880-201ENSMUST00000203748 871 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.51□□□□□ -0.89
Sec61a2Q9JLR1 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.5□□□□□ -0.89
Sec61a2Q9JLR1 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms