Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm6407-201ENSMUST00000176468 549 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm4654-201ENSMUST00000183305 982 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm37020-201ENSMUST00000195303 992 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm42780-201ENSMUST00000197083 734 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm8162-201ENSMUST00000213951 665 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm1821-202ENSMUST00000227415 750 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc28bQ8CEG5 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm43820-201ENSMUST00000199414 3346 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm14017-201ENSMUST00000121934 386 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm26083-201ENSMUST00000157904 193 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm16165-201ENSMUST00000160140 795 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm37905-201ENSMUST00000195310 341 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gm35048-201ENSMUST00000192105 2802 ntBASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc28bQ8CEG5 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm12663-201ENSMUST00000118481 958 ntBASIC10.37□□□□□ -0.75
Ccdc28bQ8CEG5 Gm11824-201ENSMUST00000120191 846 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms