Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm22582-201ENSMUST00000102283 94 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm5510-201ENSMUST00000117826 486 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Mir1941-201ENSMUST00000157834 83 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm9515-201ENSMUST00000200276 647 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm7238-201ENSMUST00000206467 973 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 CT025525.2-201ENSMUST00000227743 423 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rc3h1Q4VGL6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm22495-201ENSMUST00000104492 126 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm11235-201ENSMUST00000117763 333 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm26943-201ENSMUST00000182295 957 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm37141-201ENSMUST00000191938 422 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm42859-201ENSMUST00000199572 193 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm8190-201ENSMUST00000199603 586 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm43811-201ENSMUST00000202862 695 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm44420-201ENSMUST00000203669 490 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm5340-201ENSMUST00000203733 880 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm8796-201ENSMUST00000219122 936 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Klf10-203ENSMUST00000227920 2144 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rc3h1Q4VGL6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rc3h1Q4VGL6 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms