Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.86□□□□□ -0.67
Sox1P53783 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox1P53783 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm12133-201ENSMUST00000121775 661 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox1P53783 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox1P53783 Gm5459-201ENSMUST00000171235 798 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Mir5108-201ENSMUST00000175276 85 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox1P53783 Gm4891-201ENSMUST00000182279 912 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm6439-201ENSMUST00000199849 862 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 Gm18857-201ENSMUST00000210421 901 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm5668-201ENSMUST00000220897 436 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox1P53783 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox1P53783 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.85□□□□□ -0.67
Sox1P53783 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox1P53783 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox1P53783 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox1P53783 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.84□□□□□ -0.67
Sox1P53783 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox1P53783 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox1P53783 Mir291b-201ENSMUST00000104838 79 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Gm649-201ENSMUST00000117284 1054 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Gm13975-201ENSMUST00000119253 782 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Gm13792-201ENSMUST00000121350 423 ntBASIC10.84□□□□□ -0.67
Sox1P53783 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Gm38153-201ENSMUST00000195484 472 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC10.84□□□□□ -0.67
Sox1P53783 Gm18538-201ENSMUST00000204265 484 ntBASIC10.84□□□□□ -0.67
Sox1P53783 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.84□□□□□ -0.67
Sox1P53783 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms