Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm10580-201ENSMUST00000097985 396 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm10582-201ENSMUST00000097987 396 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm10583-201ENSMUST00000097988 396 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm37264-201ENSMUST00000194916 2192 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Nln-205ENSMUST00000224945 2486 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm12136-201ENSMUST00000120460 1209 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm14052-201ENSMUST00000121434 1031 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm4775-201ENSMUST00000169588 402 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 AC164099.1-201ENSMUST00000227780 333 ntBASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usf3B2RUQ2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.84□□□□□ -1
Usf3B2RUQ2 Gm45053-201ENSMUST00000206112 2499 ntBASIC8.84□□□□□ -1
Usf3B2RUQ2 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -1
Usf3B2RUQ2 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC8.84□□□□□ -1
Usf3B2RUQ2 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm26684-202ENSMUST00000228229 8257 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm44103-201ENSMUST00000204364 3662 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm9133-201ENSMUST00000118289 540 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm14113-201ENSMUST00000121399 976 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm25394-201ENSMUST00000157338 133 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm6612-201ENSMUST00000170777 395 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm5210-201ENSMUST00000182150 1010 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm37207-201ENSMUST00000194284 296 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm5178-201ENSMUST00000219380 898 ntBASIC8.83□□□□□ -1
Usf3B2RUQ2 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms