Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm11824-201ENSMUST00000120191 846 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm15031-201ENSMUST00000121341 210 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm12950-201ENSMUST00000121683 417 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm19587-201ENSMUST00000191395 545 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.96□□□□□ -0.82
Clrn1Q8K445 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Clrn1Q8K445 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm14234-201ENSMUST00000119539 845 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm8723-201ENSMUST00000166076 820 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm8701-201ENSMUST00000169259 874 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm5298-201ENSMUST00000201122 892 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.95□□□□□ -0.82
Clrn1Q8K445 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clrn1Q8K445 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clrn1Q8K445 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm11919-201ENSMUST00000117609 721 ntBASIC9.94□□□□□ -0.82
Clrn1Q8K445 Gm11980-201ENSMUST00000121445 986 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms