Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc17Q8CE13 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.08□□□□□ -0.64
Ccdc17Q8CE13 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc17Q8CE13 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc17Q8CE13 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm12028-201ENSMUST00000118065 436 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm13857-201ENSMUST00000139645 173 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Mir8111-201ENSMUST00000184463 137 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc17Q8CE13 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm13192-201ENSMUST00000101199 208 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm13426-201ENSMUST00000117887 795 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm10443-201ENSMUST00000119024 210 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm5976-201ENSMUST00000180794 996 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm17944-201ENSMUST00000186351 643 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm8643-201ENSMUST00000195228 625 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm20568-201ENSMUST00000197129 208 ntBASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ccdc17Q8CE13 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms