Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm13827-201ENSMUST00000148801 372 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm25661-201ENSMUST00000157704 296 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm16581-201ENSMUST00000160730 991 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm37207-201ENSMUST00000194284 296 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm44388-201ENSMUST00000204350 258 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm3791-201ENSMUST00000220790 768 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 AC156016.4-201ENSMUST00000227470 647 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Alx1Q8C8B0 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.28□□□□□ -0.44
Alx1Q8C8B0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx1Q8C8B0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm13094-201ENSMUST00000117930 409 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm8152-201ENSMUST00000120842 637 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm5254-201ENSMUST00000188353 977 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm5311-201ENSMUST00000203518 709 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm44420-201ENSMUST00000203669 490 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx1Q8C8B0 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm6773-201ENSMUST00000182377 878 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm29763-201ENSMUST00000205306 616 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm45893-201ENSMUST00000211899 247 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm19121-201ENSMUST00000215720 1022 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm7904-201ENSMUST00000217049 465 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 AC100406.1-201ENSMUST00000217305 480 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm6353-201ENSMUST00000223234 1051 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms