Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm37723-201ENSMUST00000194480 565 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm34379-201ENSMUST00000195036 290 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm42803-201ENSMUST00000201051 451 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm44487-201ENSMUST00000205145 325 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm18123-201ENSMUST00000210874 822 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm18122-201ENSMUST00000211390 904 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 AC154575.1-201ENSMUST00000227166 1474 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm12947-201ENSMUST00000116114 420 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm23081-201ENSMUST00000157845 297 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm27438-201ENSMUST00000183480 110 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gm44640-201ENSMUST00000206894 247 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim9Q8C7M3 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim9Q8C7M3 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trim9Q8C7M3 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.58□□□□□ -0.55
Trim9Q8C7M3 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim9Q8C7M3 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim9Q8C7M3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm13981-201ENSMUST00000122360 447 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm29543-201ENSMUST00000188138 967 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm45308-201ENSMUST00000210610 415 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms