Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm7967-202ENSMUST00000191042 5042 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm11354-201ENSMUST00000121974 422 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm15171-201ENSMUST00000122191 334 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm29543-201ENSMUST00000188138 967 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm45094-201ENSMUST00000207013 617 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm24541-201ENSMUST00000103871 96 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm12028-201ENSMUST00000118065 436 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Mir432-201ENSMUST00000157230 75 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm22876-201ENSMUST00000175450 298 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm18595-201ENSMUST00000175736 1068 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm27316-201ENSMUST00000184884 277 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm21139-201ENSMUST00000186594 877 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm38349-201ENSMUST00000195732 462 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm5881-201ENSMUST00000204737 367 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm40879-201ENSMUST00000220759 612 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pcdh19Q80TF3 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms