Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm3P62311 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC9.48□□□□□ -0.89
Lsm3P62311 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm3P62311 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Msh4-203ENSMUST00000188338 2802 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm43764-201ENSMUST00000202553 3172 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm7353-201ENSMUST00000069044 2866 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Arid3b-201ENSMUST00000004780 3785 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Gm16518-201ENSMUST00000117960 508 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Gm15711-201ENSMUST00000118889 535 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Gm11736-201ENSMUST00000121468 505 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lsm3P62311 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Lsm3P62311 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.47□□□□□ -0.89
Lsm3P62311 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm10288-201ENSMUST00000084614 537 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gm3712-201ENSMUST00000118523 2071 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Lsm3P62311 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Lsm3P62311 Piwil4-201ENSMUST00000076946 2637 ntTSL 2 BASIC9.47□□□□□ -0.89
Lsm3P62311 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.47□□□□□ -0.89
Lsm3P62311 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lsm3P62311 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm3P62311 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 AC138284.4-201ENSMUST00000216704 2882 ntBASIC9.46□□□□□ -0.89
Lsm3P62311 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Lsm3P62311 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Lsm3P62311 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Lpar1-204ENSMUST00000107574 3437 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 C1ra-201ENSMUST00000068593 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lsm3P62311 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lsm3P62311 AC133934.1-201ENSMUST00000223052 1761 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Lsm3P62311 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm3P62311 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Gm12407-201ENSMUST00000180219 324 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm3P62311 AI463170-201ENSMUST00000217839 970 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm3P62311 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.46□□□□□ -0.9
Lsm3P62311 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lsm3P62311 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms