Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdx2P43241 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cdx2P43241 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Cdx2P43241 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm24161-201ENSMUST00000104592 130 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm7781-201ENSMUST00000117258 788 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gm11771-201ENSMUST00000118124 732 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gm12684-201ENSMUST00000118675 999 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gm13898-201ENSMUST00000141865 610 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm5291-201ENSMUST00000201965 899 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 AC166061.1-201ENSMUST00000225163 1138 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 AC161877.1-201ENSMUST00000227736 699 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm16477-201ENSMUST00000085365 801 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm17415-201ENSMUST00000096427 789 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cdx2P43241 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.05□□□□□ -0.8
Cdx2P43241 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdx2P43241 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdx2P43241 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cdx2P43241 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm14853-201ENSMUST00000116081 549 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Gm13215-201ENSMUST00000117559 472 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.04□□□□□ -0.8
Cdx2P43241 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm26379-201ENSMUST00000178125 138 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Gm21963-201ENSMUST00000179519 330 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm38103-201ENSMUST00000191707 864 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm4866-201ENSMUST00000197408 589 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Gm34248-201ENSMUST00000200027 474 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm6859-201ENSMUST00000218614 989 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.04□□□□□ -0.8
Cdx2P43241 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx2P43241 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx2P43241 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms