Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm24368-201ENSMUST00000175388 106 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Gm6216-201ENSMUST00000182390 687 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Gm7251-201ENSMUST00000182661 1009 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm43866-201ENSMUST00000203894 839 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 AC100406.1-201ENSMUST00000217305 480 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 AC161877.1-201ENSMUST00000227736 699 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vcam1P29533 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vcam1P29533 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.11□□□□□ -0.47
Vcam1P29533 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Gm10344-201ENSMUST00000193498 1419 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 AA474408-201ENSMUST00000098110 3339 ntBASIC12.11□□□□□ -0.47
Vcam1P29533 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vcam1P29533 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.1□□□□□ -0.47
Vcam1P29533 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Gm15132-201ENSMUST00000118581 652 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm13281-201ENSMUST00000120871 567 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm25394-201ENSMUST00000157338 133 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm26532-201ENSMUST00000180630 690 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm18894-201ENSMUST00000198794 694 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm17936-201ENSMUST00000199413 988 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vcam1P29533 Gm44908-201ENSMUST00000208610 266 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC12.1□□□□□ -0.47
Vcam1P29533 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 CT025689.5-201ENSMUST00000224316 986 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Gm42731-201ENSMUST00000201839 1641 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vcam1P29533 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vcam1P29533 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vcam1P29533 Gm4880-201ENSMUST00000207645 1696 ntBASIC12.1□□□□□ -0.47
Vcam1P29533 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Vcam1P29533 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vcam1P29533 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm26356-201ENSMUST00000158217 283 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm21963-201ENSMUST00000179519 330 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Gm6773-201ENSMUST00000182377 878 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm21631-201ENSMUST00000195041 754 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 BB187690-201ENSMUST00000198619 1176 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm31941-201ENSMUST00000209689 350 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm18119-201ENSMUST00000219972 616 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vcam1P29533 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vcam1P29533 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Vcam1P29533 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vcam1P29533 Gm11427-201ENSMUST00000117952 1696 ntBASIC12.09□□□□□ -0.47
Vcam1P29533 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms