Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col8a2P25318 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Col8a2P25318 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col8a2P25318 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Col8a2P25318 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm11824-201ENSMUST00000120191 846 ntBASIC8.8□□□□□ -1
Col8a2P25318 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Mir1941-201ENSMUST00000157834 83 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC8.8□□□□□ -1
Col8a2P25318 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm8451-201ENSMUST00000170338 447 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm9625-201ENSMUST00000180422 955 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm29543-201ENSMUST00000188138 967 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm7445-201ENSMUST00000192115 340 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm33366-201ENSMUST00000195583 3827 ntBASIC8.8□□□□□ -1
Col8a2P25318 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm42859-201ENSMUST00000199572 193 ntBASIC8.8□□□□□ -1
Col8a2P25318 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC8.8□□□□□ -1
Col8a2P25318 Gm42732-201ENSMUST00000202887 1197 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm5881-201ENSMUST00000204737 367 ntBASIC8.8□□□□□ -1
Col8a2P25318 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC8.8□□□□□ -1
Col8a2P25318 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 AC153962.2-201ENSMUST00000219417 550 ntBASIC8.8□□□□□ -1
Col8a2P25318 AC101205.2-201ENSMUST00000226206 715 ntBASIC8.8□□□□□ -1
Col8a2P25318 AC141884.2-201ENSMUST00000228811 775 ntBASIC8.8□□□□□ -1
Col8a2P25318 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm5453-201ENSMUST00000080866 447 ntBASIC8.8□□□□□ -1
Col8a2P25318 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col8a2P25318 Gm38344-201ENSMUST00000195306 1353 ntBASIC8.8□□□□□ -1
Col8a2P25318 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 AC108416.1-201ENSMUST00000228755 1558 ntBASIC8.8□□□□□ -1
Col8a2P25318 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC8.8□□□□□ -1
Col8a2P25318 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col8a2P25318 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Col8a2P25318 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Gm17836-201ENSMUST00000191976 1302 ntBASIC8.8□□□□□ -1
Col8a2P25318 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Col8a2P25318 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col8a2P25318 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Gm37242-201ENSMUST00000191873 2085 ntBASIC8.79□□□□□ -1
Col8a2P25318 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.79□□□□□ -1
Col8a2P25318 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.79□□□□□ -1
Col8a2P25318 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Gm23745-201ENSMUST00000104230 125 ntBASIC8.79□□□□□ -1
Col8a2P25318 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC8.79□□□□□ -1
Col8a2P25318 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC8.79□□□□□ -1
Col8a2P25318 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Mir432-201ENSMUST00000157230 75 ntBASIC8.79□□□□□ -1
Col8a2P25318 Gm6686-201ENSMUST00000178455 258 ntBASIC8.79□□□□□ -1
Col8a2P25318 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col8a2P25318 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col8a2P25318 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Col8a2P25318 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC8.79□□□□□ -1
Col8a2P25318 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC8.79□□□□□ -1
Col8a2P25318 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms