Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.96□□□□□ -0.49
Syngap1F6SEU4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syngap1F6SEU4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.96□□□□□ -0.5
Syngap1F6SEU4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.96□□□□□ -0.5
Syngap1F6SEU4 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm22662-201ENSMUST00000175290 256 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm20091-201ENSMUST00000179683 189 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syngap1F6SEU4 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.94□□□□□ -0.5
Syngap1F6SEU4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms