Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm19409-201ENSMUST00000198244 2858 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm13461-201ENSMUST00000120980 662 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm14277-201ENSMUST00000121195 360 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm2383-201ENSMUST00000181461 807 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm27530-201ENSMUST00000184096 98 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm29499-201ENSMUST00000189151 486 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm28329-201ENSMUST00000191208 689 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm29171-201ENSMUST00000191397 486 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 AC154176.2-201ENSMUST00000225376 6429 ntBASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Hk1-201ENSMUST00000072357 3639 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ube4bQ9ES00 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms