Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp4cQ9D7F7 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm14892-201ENSMUST00000117636 267 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Mir1956-201ENSMUST00000157748 65 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm15744-201ENSMUST00000161734 213 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Mir7076-201ENSMUST00000183519 74 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm7880-201ENSMUST00000203748 871 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm44158-201ENSMUST00000203881 505 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm45594-201ENSMUST00000211717 241 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm7525-201ENSMUST00000219425 454 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp4cQ9D7F7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm15131-201ENSMUST00000119124 595 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm12899-201ENSMUST00000120565 551 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Nsd1-205ENSMUST00000224693 852 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Gm10179-201ENSMUST00000086233 688 ntBASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp4cQ9D7F7 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms