Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm6517-201ENSMUST00000121056 511 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Usp33Q8R5K2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm44745-201ENSMUST00000206563 2723 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Snora68-201ENSMUST00000104375 131 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm12254-201ENSMUST00000134617 471 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm8557-201ENSMUST00000220777 475 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usp33Q8R5K2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms