Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm9574-201ENSMUST00000173127 845 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm37723-201ENSMUST00000194480 565 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm44304-201ENSMUST00000200509 145 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm4604-201ENSMUST00000025040 390 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm25514-201ENSMUST00000083860 135 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Upf3bQ3ULL6 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm23612-201ENSMUST00000103823 110 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm15136-201ENSMUST00000120552 533 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm13022-201ENSMUST00000121181 285 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm15196-201ENSMUST00000121406 482 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm26272-201ENSMUST00000179241 132 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm23576-201ENSMUST00000179918 110 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Mir6958-201ENSMUST00000184207 73 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm42430-201ENSMUST00000197209 616 ntBASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Upf3bQ3ULL6 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm12947-201ENSMUST00000116114 420 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm14213-201ENSMUST00000119778 768 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm14006-201ENSMUST00000122132 981 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm16441-201ENSMUST00000138176 924 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm6038-201ENSMUST00000154310 948 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 Gm44640-201ENSMUST00000206894 247 ntBASIC11.31□□□□□ -0.6
Upf3bQ3ULL6 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms