Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm7103-201ENSMUST00000195642 1852 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 AC121574.1-201ENSMUST00000228770 3132 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm15197-201ENSMUST00000120526 478 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm19927-201ENSMUST00000185792 781 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm8365-201ENSMUST00000197334 648 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim43aQ3TL54 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm16071-201ENSMUST00000119589 793 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm17826-201ENSMUST00000189720 798 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm5881-201ENSMUST00000204737 367 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm33080-201ENSMUST00000205429 172 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm2875-201ENSMUST00000211333 360 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm13498-201ENSMUST00000119159 2166 ntBASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim43aQ3TL54 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms